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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs5998366 chr22:32665525 C/T NDUFA6 chr22:42481529-42486959:- 0.7 8.77 3.15E-17 Box Plot
THCA rs5998366 chr22:32665525 C/T NF2 chr22:29999545-30094587:+ 0.75 8.14 3.53E-15 Box Plot
THCA rs5998366 chr22:32665525 C/T NHP2L1 chr22:42069934-42086508:- 0.72 8.18 2.53E-15 Box Plot
THCA rs5998366 chr22:32665525 C/T NIPSNAP1 chr22:29950797-29977326:- 0.89 8.16 2.97E-15 Box Plot
THCA rs5998366 chr22:32665525 C/T NOL12 chr22:38077680-38089485:+ 0.76 11.66 8.16E-28 Box Plot
THCA rs5998366 chr22:32665525 C/T NPTXR chr22:39214457-39239987:- 0.56 7.14 3.4E-12 Box Plot
THCA rs5998366 chr22:32665525 C/T NUP50 chr22:45559722-45583896:+ 0.67 7.7 7.88E-14 Box Plot
THCA rs5998366 chr22:32665525 C/T PES1 chr22:30972612-31003070:- 0.67 8.21 2.11E-15 Box Plot
THCA rs5998366 chr22:32665525 C/T PEX26 chr22:18560686-18613905:+ 0.44 6.52 1.84E-10 Box Plot
THCA rs5998366 chr22:32665525 C/T PHF5A chr22:41855721-41864729:- 0.81 9.47 1.3E-19 Box Plot
THCA rs5998366 chr22:32665525 C/T PI4KA chr22:21061979-21213705:- 0.57 8.24 1.63E-15 Box Plot
THCA rs5998366 chr22:32665525 C/T PICK1 chr22:38452318-38471708:+ 0.81 9.53 7.99E-20 Box Plot
THCA rs5998366 chr22:32665525 C/T PITPNB chr22:28247657-28316122:- 0.94 8.35 7.46E-16 Box Plot
THCA rs5998366 chr22:32665525 C/T PLA2G6 chr22:38507502-38601697:- 0.37 6.39 3.88E-10 Box Plot
THCA rs5998366 chr22:32665525 C/T PLXNB2 chr22:50713408-50746056:- 0.58 7.92 1.73E-14 Box Plot